HL_4P6F_178
3D structure
- PDB id
- 4P6F (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the peptolide 12C bound to bacterial ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.6 Å
Loop
- Sequence
- GCGUAAUAGC
- Length
- 10 nucleotides
- Bulged bases
- 4P6F|1|YA|A|1096
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4P6F_178 not in the Motif Atlas
- Homologous match to HL_5J7L_212
- Geometric discrepancy: 0.4898
- The information below is about HL_5J7L_212
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75293.5
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 11
Unit IDs
4P6F|1|YA|G|1091
4P6F|1|YA|C|1092
4P6F|1|YA|G|1093
4P6F|1|YA|U|1094
4P6F|1|YA|A|1095
4P6F|1|YA|A|1096
4P6F|1|YA|U|1097
4P6F|1|YA|A|1098
4P6F|1|YA|G|1099
4P6F|1|YA|C|1100
Current chains
- Chain YA
- 23S ribosomal RNA
Nearby chains
- Chain Y9
- 50S ribosomal protein L36
- Chain YH
- 50S ribosomal protein L6
Coloring options: