HL_4P6F_222
3D structure
- PDB id
- 4P6F (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the peptolide 12C bound to bacterial ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.6 Å
Loop
- Sequence
- GGUUCAAAUCC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4P6F_222 not in the Motif Atlas
- Homologous match to HL_4TUE_218
- Geometric discrepancy: 0.0643
- The information below is about HL_4TUE_218
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_23827.2
- Basepair signature
- cWW-cWW-F-F-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
4P6F|1|QV|G|52
4P6F|1|QV|G|53
4P6F|1|QV|U|54
4P6F|1|QV|U|55
4P6F|1|QV|C|56
4P6F|1|QV|A|57
4P6F|1|QV|A|58
4P6F|1|QV|A|59
4P6F|1|QV|U|60
4P6F|1|QV|C|61
4P6F|1|QV|C|62
Current chains
- Chain QV
- tRNA-fMet
Nearby chains
- Chain R0
- 50S ribosomal protein L27
- Chain RA
- Large subunit ribosomal RNA; LSU rRNA
- Chain RG
- 50S ribosomal protein L5
- Chain RQ
- 50S ribosomal protein L16
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