3D structure

PDB id
4P70 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of Unmodified tRNA Proline (CGG) Bound to Codon CCG on the Ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3.68 Å

Loop

Sequence
CGGUGAAAUG
Length
10 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_4P70_015 not in the Motif Atlas
Homologous match to HL_4LFB_015
Geometric discrepancy: 0.154
The information below is about HL_4LFB_015
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_75293.5
Basepair signature
cWW-F-F-F-F-F-F-F-F
Number of instances in this motif group
11

Unit IDs

4P70|1|QA|C|689
4P70|1|QA|G|690
4P70|1|QA|G|691
4P70|1|QA|U|692
4P70|1|QA|G|693
4P70|1|QA|A|694
4P70|1|QA|A|695
4P70|1|QA|A|696
4P70|1|QA|U|697
4P70|1|QA|G|698

Current chains

Chain QA
16S rRNA

Nearby chains

Chain QG
30S ribosomal protein S7
Chain QK
30S ribosomal protein S11
Chain RA
Large subunit ribosomal RNA; LSU rRNA

Coloring options:


Copyright 2025 BGSU RNA group. Page generated in 0.6942 s