HL_4P95_002
3D structure
- PDB id
- 4P95 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Speciation of a group I intron into a lariat capping ribozyme (Circularly permutated ribozyme)
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.5 Å
Loop
- Sequence
- GCUAAUCAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- Anticodon loop related
- Broad Annotation
- Lariat-capping (LC) ribozyme
- Motif group
- HL_97724.1
- Basepair signature
- cWW-bif-R-R-R-R-R
- Number of instances in this motif group
- 28
Unit IDs
4P95|1|A|G|241
4P95|1|A|C|242
4P95|1|A|U|243
4P95|1|A|A|244
4P95|1|A|A|245
4P95|1|A|U|246
4P95|1|A|C|247
4P95|1|A|A|248
4P95|1|A|C|249
Current chains
- Chain A
- RNA (192-MER)
Nearby chains
No other chains within 10ÅColoring options: