HL_4QCN_052
3D structure
- PDB id
- 4QCN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA- substrates in the A and P sites. This entry contains the 50S subunit of the first 70S ribosome in the ASU.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.6 Å
Loop
- Sequence
- CUAAAAGGUAACG
- Length
- 13 nucleotides
- Bulged bases
- 4QCN|1|A|A|2280, 4QCN|1|A|C|2287
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_41833.7
- Basepair signature
- cWW-tSH-tHH-tWW-R-R-R
- Number of instances in this motif group
- 10
Unit IDs
4QCN|1|A|C|2276
4QCN|1|A|U|2277
4QCN|1|A|A|2278
4QCN|1|A|A|2279
4QCN|1|A|A|2280
4QCN|1|A|A|2281
4QCN|1|A|G|2282
4QCN|1|A|G|2283
4QCN|1|A|U|2284
4QCN|1|A|A|2285
4QCN|1|A|A|2286
4QCN|1|A|C|2287
4QCN|1|A|G|2288
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain 0
- 50S ribosomal protein L27
- Chain B
- 5S Ribosomal RNA
- Chain Q
- 50S ribosomal protein L16
Coloring options: