HL_4QCN_064
3D structure
- PDB id
- 4QCN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA- substrates in the A and P sites. This entry contains the 50S subunit of the first 70S ribosome in the ASU.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.6 Å
Loop
- Sequence
- CUGAAAGCAUCUAAG
- Length
- 15 nucleotides
- Bulged bases
- 4QCN|1|A|G|2764, 4QCN|1|A|C|2768
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_70420.7
- Basepair signature
- cWW-tSH-cWH-tSH-tWH-tHW-tHW-R-R
- Number of instances in this motif group
- 10
Unit IDs
4QCN|1|A|C|2758
4QCN|1|A|U|2759
4QCN|1|A|G|2760
4QCN|1|A|A|2761
4QCN|1|A|A|2762
4QCN|1|A|A|2763
4QCN|1|A|G|2764
4QCN|1|A|C|2765
4QCN|1|A|A|2766
4QCN|1|A|U|2767
4QCN|1|A|C|2768
4QCN|1|A|U|2769
4QCN|1|A|A|2770
4QCN|1|A|A|2771
4QCN|1|A|G|2772
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain 9
- 50S ribosomal protein L36
- Chain H
- 50S ribosomal protein L6
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