HL_4QK8_003
3D structure
- PDB id
- 4QK8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Thermoanaerobacter pseudethanolicus c-di-AMP riboswitch
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.05 Å
Loop
- Sequence
- UACCUUCUG
- Length
- 9 nucleotides
- Bulged bases
- 4QK8|1|A|A|72
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_46142.4
- Basepair signature
- cWW-R-R-R-R-R
- Number of instances in this motif group
- 20
Unit IDs
4QK8|1|A|U|71
4QK8|1|A|A|72
4QK8|1|A|C|73
4QK8|1|A|C|74
4QK8|1|A|U|75
4QK8|1|A|U|76
4QK8|1|A|C|77
4QK8|1|A|U|78
4QK8|1|A|G|79
Current chains
- Chain A
- C-di-AMP riboswitch
Nearby chains
No other chains within 10ÅColoring options: