HL_4R0D_017

3D structure

PDB id

4R0D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of a eukaryotic group II intron lariat

Experimental method

X-RAY DIFFRACTION

Resolution

3.68 Å

Loop

Sequence

UCUUUCGACAUAAGGGAGA

Length

19 nucleotides

Bulged bases

4R0D|1|A|U|224

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4R0D|1|A|U|214
4R0D|1|A|C|215
4R0D|1|A|U|216
4R0D|1|A|U|217
4R0D|1|A|U|218
4R0D|1|A|C|219
4R0D|1|A|G|220
4R0D|1|A|A|221
4R0D|1|A|C|222
4R0D|1|A|A|223
4R0D|1|A|U|224
4R0D|1|A|A|225
4R0D|1|A|A|226
4R0D|1|A|G|227
4R0D|1|A|G|228
4R0D|1|A|G|229
4R0D|1|A|A|230
4R0D|1|A|G|231
4R0D|1|A|A|232

Current chains

Chain A

GROUP IIB INTRON LARIAT

Nearby chains