HL_4RQE_004
3D structure
- PDB id
- 4RQE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- human Seryl-tRNA synthetase dimer complexed with two molecules of tRNAsec
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 4 Å
Loop
- Sequence
- GUUCAAUUC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4RQE_004 not in the Motif Atlas
- Homologous match to HL_3W3S_004
- Geometric discrepancy: 0.1308
- The information below is about HL_3W3S_004
- Detailed Annotation
- T-loop with 2 stacked bulged bases
- Broad Annotation
- T-loop
- Motif group
- HL_33597.4
- Basepair signature
- cWW-tWH-F-F-F-F-F
- Number of instances in this motif group
- 137
Unit IDs
4RQE|1|B|G|53
4RQE|1|B|U|54
4RQE|1|B|U|55
4RQE|1|B|C|56
4RQE|1|B|A|57
4RQE|1|B|A|58
4RQE|1|B|U|59
4RQE|1|B|U|60
4RQE|1|B|C|61
Current chains
- Chain B
- selenocysteine tRNA
Nearby chains
- Chain A
- Serine--tRNA ligase, cytoplasmic
Coloring options: