3D structure

PDB id
4TUA (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of ASL-Thr bound to Codon ACC-A on the Ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3.6 Å

Loop

Sequence
GGACGGAAAUC
Length
11 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_4TUA_093 not in the Motif Atlas
Homologous match to HL_5J7L_188
Geometric discrepancy: 0.2285
The information below is about HL_5J7L_188
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_11805.4
Basepair signature
cWW-F-F-F-F-F-F-F-F-F
Number of instances in this motif group
3

Unit IDs

4TUA|1|RA|G|2303
4TUA|1|RA|G|2304
4TUA|1|RA|A|2305
4TUA|1|RA|C|2306
4TUA|1|RA|G|2307
4TUA|1|RA|G|2308
4TUA|1|RA|A|2309
4TUA|1|RA|A|2310
4TUA|1|RA|A|2311
4TUA|1|RA|U|2312
4TUA|1|RA|C|2313

Current chains

Chain RA
23S rRNA

Nearby chains

Chain RB
5S ribosomal RNA; 5S rRNA
Chain RG
50S ribosomal protein L5

Coloring options:


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