HL_4TUA_098

3D structure

PDB id

4TUA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of ASL-Thr bound to Codon ACC-A on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

CGUCCACAG

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4TUA_098 not in the Motif Atlas

Homologous match to HL_7A0S_059

Geometric discrepancy: 0.1601

The information below is about HL_7A0S_059

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_32735.2

Basepair signature

cWW-tSH-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

4TUA|1|RA|C|2471
4TUA|1|RA|G|2472
4TUA|1|RA|U|2473
4TUA|1|RA|C|2474
4TUA|1|RA|C|2475
4TUA|1|RA|A|2476
4TUA|1|RA|C|2477
4TUA|1|RA|A|2478
4TUA|1|RA|G|2479

Current chains

Chain RA

23S rRNA

Nearby chains

Chain R9

50S ribosomal protein L36

Chain RQ

50S ribosomal protein L16