3D structure

PDB id
4TUA (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of ASL-Thr bound to Codon ACC-A on the Ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3.6 Å

Loop

Sequence
CGGUGAAAUG
Length
10 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_4TUA_124 not in the Motif Atlas
Homologous match to HL_5J7L_015
Geometric discrepancy: 0.146
The information below is about HL_5J7L_015
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_75293.5
Basepair signature
cWW-F-F-F-F-F-F-F-F
Number of instances in this motif group
11

Unit IDs

4TUA|1|XA|C|689
4TUA|1|XA|G|690
4TUA|1|XA|G|691
4TUA|1|XA|U|692
4TUA|1|XA|G|693
4TUA|1|XA|A|694
4TUA|1|XA|A|695
4TUA|1|XA|A|696
4TUA|1|XA|U|697
4TUA|1|XA|G|698

Current chains

Chain XA
16S rRNA

Nearby chains

Chain XG
30S ribosomal protein S7
Chain XK
30S ribosomal protein S11
Chain YA
Large subunit ribosomal RNA; LSU rRNA

Coloring options:


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