HL_4TUA_162

3D structure

PDB id

4TUA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of ASL-Thr bound to Codon ACC-A on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

CGCAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4TUA_162 not in the Motif Atlas

Geometric match to HL_5J7L_179

Geometric discrepancy: 0.258

The information below is about HL_5J7L_179

Detailed Annotation

GNRA related

Broad Annotation

GNRA related

Motif group

HL_04783.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

9

Unit IDs

4TUA|1|YA|C|544
4TUA|1|YA|G|545
4TUA|1|YA|C|546
4TUA|1|YA|A|547
4TUA|1|YA|A|548
4TUA|1|YA|G|549

Current chains

Chain YA

23S rRNA

Nearby chains

Chain YN

50S ribosomal protein L13

Chain YV

50S ribosomal protein L21