HL_4TUA_220

3D structure

PDB id

4TUA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of ASL-Thr bound to Codon ACC-A on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

CCUUCGGG

Length

8 nucleotides

Bulged bases

4TUA|1|QA|U|421, 4TUA|1|QA|C|422

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4TUA_220 not in the Motif Atlas

Geometric match to HL_7MLW_004

Geometric discrepancy: 0.3022

The information below is about HL_7MLW_004

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_83003.1

Basepair signature

cWW-cWW-F-F-F

Number of instances in this motif group

6

Unit IDs

4TUA|1|QA|C|418
4TUA|1|QA|C|419
4TUA|1|QA|U|420
4TUA|1|QA|U|421
4TUA|1|QA|C|422
4TUA|1|QA|G|423
4TUA|1|QA|G|424
4TUA|1|QA|G|425

Current chains

Chain QA

16S rRNA

Nearby chains

Chain QC

30S ribosomal protein S3

Chain QD

30S ribosomal protein S4