HL_4TUB_062

3D structure

PDB id

4TUB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA-Thr bound to Codon ACC-C on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

UUUAGG

Length

6 nucleotides

Bulged bases

4TUB|1|RA|U|874, 4TUB|1|RA|G|877

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4TUB_062 not in the Motif Atlas

Homologous match to HL_5J7L_157

Geometric discrepancy: 0.1219

The information below is about HL_5J7L_157

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_55195.3

Basepair signature

cWW-F

Number of instances in this motif group

6

Unit IDs

4TUB|1|RA|U|873
4TUB|1|RA|U|874
4TUB|1|RA|U|875
4TUB|1|RA|A|876
4TUB|1|RA|G|877
4TUB|1|RA|G|878

Current chains

Chain RA

23S rRNA

Nearby chains

Chain RP

50S ribosomal protein L15