HL_4TUB_063

3D structure

PDB id

4TUB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA-Thr bound to Codon ACC-C on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

GCCCACCAGC

Length

10 nucleotides

Bulged bases

4TUB|1|RA|C|932, 4TUB|1|RA|C|935

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4TUB_063 not in the Motif Atlas

Homologous match to HL_5J7L_158

Geometric discrepancy: 0.5228

The information below is about HL_5J7L_158

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4TUB|1|RA|G|930
4TUB|1|RA|C|931
4TUB|1|RA|C|932
4TUB|1|RA|C|933
4TUB|1|RA|A|934
4TUB|1|RA|C|935
4TUB|1|RA|C|936
4TUB|1|RA|A|937
4TUB|1|RA|G|938
4TUB|1|RA|C|939

Current chains

Chain RA

23S rRNA

Nearby chains

Chain QM

30S ribosomal protein S13