HL_4TUB_073

3D structure

PDB id

4TUB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA-Thr bound to Codon ACC-C on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

GUUAAUAUUC

Length

10 nucleotides

Bulged bases

4TUB|1|RA|U|1442, 4TUB|1|RA|U|1443

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4TUB_073 not in the Motif Atlas

Homologous match to HL_7RQB_036

Geometric discrepancy: 0.1031

The information below is about HL_7RQB_036

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_69023.2

Basepair signature

cWW-tWH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

4TUB|1|RA|G|1435
4TUB|1|RA|U|1436
4TUB|1|RA|U|1437
4TUB|1|RA|A|1438
4TUB|1|RA|A|1439
4TUB|1|RA|U|1440
4TUB|1|RA|A|1441
4TUB|1|RA|U|1442
4TUB|1|RA|U|1443
4TUB|1|RA|C|1444

Current chains

Chain RA

23S rRNA

Nearby chains

Chain RX

50S ribosomal protein L23