HL_4TUB_100

3D structure

PDB id

4TUB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA-Thr bound to Codon ACC-C on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

CUGUUCG

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4TUB_100 not in the Motif Atlas

Homologous match to HL_4WF9_058

Geometric discrepancy: 0.1114

The information below is about HL_4WF9_058

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_30068.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

15

Unit IDs

4TUB|1|RA|C|2563
4TUB|1|RA|U|2564
4TUB|1|RA|G|2565
4TUB|1|RA|U|2566
4TUB|1|RA|U|2567
4TUB|1|RA|C|2568
4TUB|1|RA|G|2569

Current chains

Chain RA

23S rRNA

Nearby chains

Chain Z5

CC-Puro