HL_4TUB_121

3D structure

PDB id

4TUB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA-Thr bound to Codon ACC-C on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

CGACGAG

Length

7 nucleotides

Bulged bases

4TUB|1|XA|C|466

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4TUB_121 not in the Motif Atlas

Homologous match to HL_4LFB_012

Geometric discrepancy: 0.1686

The information below is about HL_4LFB_012

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

4TUB|1|XA|C|458
4TUB|1|XA|G|464
4TUB|1|XA|A|465
4TUB|1|XA|C|466
4TUB|1|XA|G|467
4TUB|1|XA|A|468
4TUB|1|XA|G|474

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XP

30S ribosomal protein S16