HL_4TUB_128

3D structure

PDB id

4TUB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA-Thr bound to Codon ACC-C on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

CUAACG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4TUB_128 not in the Motif Atlas

Homologous match to HL_4LFB_019

Geometric discrepancy: 0.0866

The information below is about HL_4LFB_019

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

335

Unit IDs

4TUB|1|XA|C|862
4TUB|1|XA|U|863
4TUB|1|XA|A|864
4TUB|1|XA|A|865
4TUB|1|XA|C|866
4TUB|1|XA|G|867

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XE

30S ribosomal protein S5

Chain XH

30S ribosomal protein S8