HL_4TUB_156

3D structure

PDB id

4TUB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA-Thr bound to Codon ACC-C on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

CAGAG

Length

5 nucleotides

Bulged bases

4TUB|1|YA|G|321, 4TUB|1|YA|A|322

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4TUB_156 not in the Motif Atlas

Homologous match to HL_7RQB_011

Geometric discrepancy: 0.0671

The information below is about HL_7RQB_011

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_70546.1

Basepair signature

cWW-F

Number of instances in this motif group

18

Unit IDs

4TUB|1|YA|C|319
4TUB|1|YA|A|320
4TUB|1|YA|G|321
4TUB|1|YA|A|322
4TUB|1|YA|G|323

Current chains

Chain YA

23S rRNA

Nearby chains

Chain YF

50S ribosomal protein L4