HL_4TUB_160

3D structure

PDB id

4TUB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA-Thr bound to Codon ACC-C on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

CGUGAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4TUB_160 not in the Motif Atlas

Homologous match to HL_7RQB_015

Geometric discrepancy: 0.0681

The information below is about HL_7RQB_015

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_35490.2

Basepair signature

cWW-tSH-F-F

Number of instances in this motif group

299

Unit IDs

4TUB|1|YA|C|462
4TUB|1|YA|G|463
4TUB|1|YA|U|464
4TUB|1|YA|G|465
4TUB|1|YA|A|466
4TUB|1|YA|G|467

Current chains

Chain YA

23S rRNA

Nearby chains

Chain Y7

50S ribosomal protein L34

Chain YF

50S ribosomal protein L4