HL_4TUB_171

3D structure

PDB id

4TUB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA-Thr bound to Codon ACC-C on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

UUUAGG

Length

6 nucleotides

Bulged bases

4TUB|1|YA|U|827, 4TUB|1|YA|G|830

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4TUB_171 not in the Motif Atlas

Homologous match to HL_5J7L_157

Geometric discrepancy: 0.1101

The information below is about HL_5J7L_157

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_55195.3

Basepair signature

cWW-F

Number of instances in this motif group

6

Unit IDs

4TUB|1|YA|U|826
4TUB|1|YA|U|827
4TUB|1|YA|U|828
4TUB|1|YA|A|829
4TUB|1|YA|G|830
4TUB|1|YA|G|831

Current chains

Chain YA

23S rRNA

Nearby chains

Chain YP

50S ribosomal protein L15