HL_4TUC_028

3D structure

PDB id

4TUC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of ASL-SufJ bound to Codon ACC-A on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

GGCAAC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4TUC_028 not in the Motif Atlas

Homologous match to HL_5J7L_027

Geometric discrepancy: 0.1037

The information below is about HL_5J7L_027

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_85603.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

284

Unit IDs

4TUC|1|QA|G|1265
4TUC|1|QA|G|1266
4TUC|1|QA|C|1267
4TUC|1|QA|A|1268
4TUC|1|QA|A|1269
4TUC|1|QA|C|1270

Current chains

Chain QA

16S rRNA

Nearby chains

Chain QM

30S ribosomal protein S13

Chain QS

30S ribosomal protein S19

Chain QU

30S ribosomal protein Thx