HL_4TUC_060

3D structure

PDB id

4TUC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of ASL-SufJ bound to Codon ACC-A on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

UGAAAAG

Length

7 nucleotides

Bulged bases

4TUC|1|RA|A|781, 4TUC|1|RA|A|784

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4TUC_060 not in the Motif Atlas

Homologous match to HL_7A0S_023

Geometric discrepancy: 0.1349

The information below is about HL_7A0S_023

Detailed Annotation

UNCG variation

Broad Annotation

UNCG variation

Motif group

HL_51020.2

Basepair signature

cWW-cSW-F

Number of instances in this motif group

14

Unit IDs

4TUC|1|RA|U|779
4TUC|1|RA|G|780
4TUC|1|RA|A|781
4TUC|1|RA|A|782
4TUC|1|RA|A|783
4TUC|1|RA|A|784
4TUC|1|RA|G|785

Current chains

Chain RA

23S rRNA

Nearby chains

Chain RD

50S ribosomal protein L2