3D structure

PDB id
4TUC (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of ASL-SufJ bound to Codon ACC-A on the Ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3.6 Å

Loop

Sequence
GGACGGAAAUC
Length
11 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_4TUC_092 not in the Motif Atlas
Homologous match to HL_5J7L_188
Geometric discrepancy: 0.3375
The information below is about HL_5J7L_188
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_11805.4
Basepair signature
cWW-F-F-F-F-F-F-F-F-F
Number of instances in this motif group
3

Unit IDs

4TUC|1|RA|G|2303
4TUC|1|RA|G|2304
4TUC|1|RA|A|2305
4TUC|1|RA|C|2306
4TUC|1|RA|G|2307
4TUC|1|RA|G|2308
4TUC|1|RA|A|2309
4TUC|1|RA|A|2310
4TUC|1|RA|A|2311
4TUC|1|RA|U|2312
4TUC|1|RA|C|2313

Current chains

Chain RA
23S rRNA

Nearby chains

Chain RB
5S ribosomal RNA; 5S rRNA
Chain RG
50S ribosomal protein L5

Coloring options:


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