HL_4TUC_098

3D structure

PDB id

4TUC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of ASL-SufJ bound to Codon ACC-A on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

UGAAGAAG

Length

8 nucleotides

Bulged bases

4TUC|1|RA|G|2529

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4TUC_098 not in the Motif Atlas

Homologous match to HL_7RQB_061

Geometric discrepancy: 0.0877

The information below is about HL_7RQB_061

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91104.1

Basepair signature

cWW-F

Number of instances in this motif group

12

Unit IDs

4TUC|1|RA|U|2528
4TUC|1|RA|G|2529
4TUC|1|RA|A|2530
4TUC|1|RA|A|2531
4TUC|1|RA|G|2532
4TUC|1|RA|A|2533
4TUC|1|RA|A|2534
4TUC|1|RA|G|2535

Current chains

Chain RA

23S rRNA

Nearby chains

Chain R9

50S ribosomal protein L36

Chain RH

50S ribosomal protein L6