HL_4TUC_201

3D structure

PDB id

4TUC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of ASL-SufJ bound to Codon ACC-A on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

GGACGGAAAUC

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4TUC_201 not in the Motif Atlas

Homologous match to HL_5J7L_188

Geometric discrepancy: 0.2333

The information below is about HL_5J7L_188

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_11805.4

Basepair signature

cWW-F-F-F-F-F-F-F-F-F

Number of instances in this motif group

3

Unit IDs

4TUC|1|YA|G|2303
4TUC|1|YA|G|2304
4TUC|1|YA|A|2305
4TUC|1|YA|C|2306
4TUC|1|YA|G|2307
4TUC|1|YA|G|2308
4TUC|1|YA|A|2309
4TUC|1|YA|A|2310
4TUC|1|YA|A|2311
4TUC|1|YA|U|2312
4TUC|1|YA|C|2313

Current chains

Chain YA

23S rRNA

Nearby chains

Chain YB

5S ribosomal RNA; 5S rRNA

Chain YG

50S ribosomal protein L5