HL_4TUE_170

3D structure

PDB id

4TUE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of ASL-SufJ bound to Codon ACC-U on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

CCCACCAG

Length

8 nucleotides

Bulged bases

4TUE|1|YA|C|885, 4TUE|1|YA|C|888

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4TUE_170 not in the Motif Atlas

Geometric match to HL_5TBW_022

Geometric discrepancy: 0.3159

The information below is about HL_5TBW_022

Detailed Annotation

Externally structured

Broad Annotation

Externally structured

Motif group

HL_96426.1

Basepair signature

cWW-F

Number of instances in this motif group

4

Unit IDs

4TUE|1|YA|C|884
4TUE|1|YA|C|885
4TUE|1|YA|C|886
4TUE|1|YA|A|887
4TUE|1|YA|C|888
4TUE|1|YA|C|889
4TUE|1|YA|A|890
4TUE|1|YA|G|892

Current chains

Chain YA

23S rRNA

Nearby chains

Chain XM

30S ribosomal protein S13

Chain XS

30S ribosomal protein S19