HL_4TUE_219

3D structure

PDB id

4TUE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of ASL-SufJ bound to Codon ACC-U on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

CCUUGGUAAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75293.5

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

11

Unit IDs

4TUE|1|QY|C|31
4TUE|1|QY|C|32
4TUE|1|QY|U|33
4TUE|1|QY|U|34
4TUE|1|QY|G|35
4TUE|1|QY|G|36
4TUE|1|QY|U|37
4TUE|1|QY|A|38
4TUE|1|QY|A|39
4TUE|1|QY|G|40

Current chains

Chain QY

A-site ASL-SufJ

Nearby chains

Chain QA

Small subunit ribosomal RNA; SSU rRNA

Chain QL

30S ribosomal protein S12

Chain QM

30S ribosomal protein S13

Chain QX

messenger RNA

Chain RA

Large subunit ribosomal RNA; LSU rRNA