HL_4U1V_005

3D structure

PDB id

4U1V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to linopristin.

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CCUUCGGG

Length

8 nucleotides

Bulged bases

4U1V|1|AA|U|209

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4U1V_005 not in the Motif Atlas

Geometric match to HL_5TBW_012

Geometric discrepancy: 0.3992

The information below is about HL_5TBW_012

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_13963.1

Basepair signature

cWW-F-F

Number of instances in this motif group

7

Unit IDs

4U1V|1|AA|C|206
4U1V|1|AA|C|207
4U1V|1|AA|U|208
4U1V|1|AA|U|209
4U1V|1|AA|C|210
4U1V|1|AA|G|211
4U1V|1|AA|G|212
4U1V|1|AA|G|213

Current chains

Chain AA

16S rRNA

Nearby chains