3D structure

PDB id
4U1V (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the E. coli ribosome bound to linopristin.
Experimental method
X-RAY DIFFRACTION
Resolution
3 Å

Loop

Sequence
CGAAAG
Length
6 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_4U1V_090 not in the Motif Atlas
Homologous match to HL_5J7L_191
Geometric discrepancy: 0.0976
The information below is about HL_5J7L_191
Detailed Annotation
GNRA
Broad Annotation
No text annotation
Motif group
HL_37824.7
Basepair signature
cWW-F-F-F-F
Number of instances in this motif group
349

Unit IDs

4U1V|1|BA|C|2374
4U1V|1|BA|G|2375
4U1V|1|BA|A|2376
4U1V|1|BA|A|2377
4U1V|1|BA|A|2378
4U1V|1|BA|G|2379

Current chains

Chain BA
23S rRNA

Nearby chains

Chain BO
50S ribosomal protein L18

Coloring options:


Copyright 2025 BGSU RNA group. Page generated in 0.0788 s