HL_4U20_157
3D structure
- PDB id
- 4U20 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the E. coli ribosome bound to flopristin.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- UGUUGAAAAA
- Length
- 10 nucleotides
- Bulged bases
- 4U20|1|DA|U|747, 4U20|1|DA|A|751, 4U20|1|DA|A|752
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4U20_157 not in the Motif Atlas
- Homologous match to HL_7A0S_022
- Geometric discrepancy: 0.1349
- The information below is about HL_7A0S_022
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50204.1
- Basepair signature
- cWW-cWS-tSW-F-F
- Number of instances in this motif group
- 11
Unit IDs
4U20|1|DA|U|744
4U20|1|DA|G|745
4U20|1|DA|U|746
4U20|1|DA|U|747
4U20|1|DA|G|748
4U20|1|DA|A|749
4U20|1|DA|A|750
4U20|1|DA|A|751
4U20|1|DA|A|752
4U20|1|DA|A|753
Current chains
- Chain DA
- 23S rRNA
Nearby chains
- Chain D0
- 50S ribosomal protein L32
- Chain D2
- 50S ribosomal protein L34
- Chain DD
- 50S ribosomal protein L3
- Chain DS
- 50S ribosomal protein L22
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