HL_4U24_112
3D structure
- PDB id
- 4U24 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the E. coli ribosome bound to dalfopristin.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- AACUGAGACACGGU
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4U24_112 not in the Motif Atlas
- Homologous match to HL_5J7L_008
- Geometric discrepancy: 0.1087
- The information below is about HL_5J7L_008
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_81205.3
- Basepair signature
- cWW-cWW-tWH-F-tWH-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
4U24|1|CA|A|320
4U24|1|CA|A|321
4U24|1|CA|C|322
4U24|1|CA|U|323
4U24|1|CA|G|324
4U24|1|CA|A|325
4U24|1|CA|G|326
4U24|1|CA|A|327
4U24|1|CA|C|328
4U24|1|CA|A|329
4U24|1|CA|C|330
4U24|1|CA|G|331
4U24|1|CA|G|332
4U24|1|CA|U|333
Current chains
- Chain CA
- 16S rRNA
Nearby chains
- Chain CP
- 30S ribosomal protein S16
- Chain CT
- 30S ribosomal protein S20
Coloring options: