HL_4U27_051

3D structure

PDB id

4U27 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to flopristin and linopristin.

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

GGAAAC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4U27_051 not in the Motif Atlas

Homologous match to HL_5J7L_152

Geometric discrepancy: 0.0794

The information below is about HL_5J7L_152

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

4U27|1|BA|G|629
4U27|1|BA|G|630
4U27|1|BA|A|631
4U27|1|BA|A|632
4U27|1|BA|A|633
4U27|1|BA|C|634

Current chains

Chain BA

23S rRNA

Nearby chains

Chain B3

50S ribosomal protein L35

Chain BL

50S ribosomal protein L15