3D structure

PDB id
4U27 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the E. coli ribosome bound to flopristin and linopristin.
Experimental method
X-RAY DIFFRACTION
Resolution
2.8 Å

Loop

Sequence
GCUUAGGC
Length
8 nucleotides
Bulged bases
4U27|1|DA|U|546, 4U27|1|DA|G|549
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_4U27_150 not in the Motif Atlas
Homologous match to HL_5J7L_149
Geometric discrepancy: 0.2543
The information below is about HL_5J7L_149
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_09452.1
Basepair signature
cWW-F-F-F
Number of instances in this motif group
3

Unit IDs

4U27|1|DA|G|543
4U27|1|DA|C|544
4U27|1|DA|U|545
4U27|1|DA|U|546
4U27|1|DA|A|547
4U27|1|DA|G|548
4U27|1|DA|G|549
4U27|1|DA|C|550

Current chains

Chain DA
23S rRNA

Nearby chains

Chain DJ
50S ribosomal protein L13
Chain DR
50S ribosomal protein L21

Coloring options:


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