Motif HL_09452.1 Version HL_09452.1 of this group appears in releases 3.89 to 3.94
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 1-5 | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_5X6B_005 | 5X6B | 0.2718 | 4 | P | tRNA | U | 13 | A | 14 | G | 15 | G | 16 | A | 21 | ncWW |
| 2 | HL_2ZZN_004 | 2ZZN | 0.0000 | 4 | D | RNA (71-MER) | U | 13 | A | 14 | G | 15 | G | 16 | A | 22 | cWW |
| 3 | HL_5J7L_149 | 5J7L | 0.4393 | 3 | DA | LSU rRNA | G | 543 | C | 544 | U | 545 | U | 546 | C | 550 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UAGGGGCUA | 2 |
| GCUUAGGC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AGGGGCU | 2 |
| CUUAGG | 1 |
- Annotations
-
- (3)
- Basepair signature
- cWW-F-F-F
- Heat map statistics
- Min 0.27 | Avg 0.28 | Max 0.54
Coloring options: