#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4 51-5
1 HL_5J7L_1495J7L0.43933DA LSU rRNAG543C544U545U546C550cWW
2 HL_2ZZN_0042ZZN0.00004DRNA (71-MER)U13A14G15G16A22cWW
3 HL_5X6B_0055X6B0.27184P tRNAU13A14G15G16A21ncWW

3D structures

Complete motif including flanking bases
SequenceCounts
UAGGGGCUA2
GCUUAGGC1
Non-Watson-Crick part of the motif
SequenceCounts
AGGGGCU2
CUUAGG1

Release history

Release3.893.903.913.923.933.943.953.963.973.98
Date2024-10-092024-11-062024-12-042025-01-012025-01-292025-02-262025-03-262025-04-232025-05-212025-06-18
StatusNew id, > 2 parentsExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (3)
  • Basepair signature
    cWW-F-F-F
    Heat map statistics
    Min 0.27 | Avg 0.28 | Max 0.54
    Help

    Coloring options:

    HL_5J7L_149:HL_5J7L_149 = 0HL_5J7L_149:HL_2ZZN_004 = 0.4393HL_5J7L_149:HL_5X6B_005 = 0.5383HL_2ZZN_004:HL_5J7L_149 = 0.4393HL_2ZZN_004:HL_2ZZN_004 = 0HL_2ZZN_004:HL_5X6B_005 = 0.2718HL_5X6B_005:HL_5J7L_149 = 0.5383HL_5X6B_005:HL_2ZZN_004 = 0.2718HL_5X6B_005:HL_5X6B_005 = 0HL_5J7L_149HL_2ZZN_004HL_5X6B_005Discrepancy0.000.100.200.300.400.50
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