HL_4U27_218
3D structure
- PDB id
- 4U27 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the E. coli ribosome bound to flopristin and linopristin.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.8 Å
Loop
- Sequence
- UUCAGAGAUGAG
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4U27_218 not in the Motif Atlas
- Homologous match to HL_5J7L_216
- Geometric discrepancy: 0.2813
- The information below is about HL_5J7L_216
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_78284.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
4U27|1|CA|U|1009
4U27|1|CA|U|1010
4U27|1|CA|C|1011
4U27|1|CA|A|1012
4U27|1|CA|G|1013
4U27|1|CA|A|1014
4U27|1|CA|G|1015
4U27|1|CA|A|1016
4U27|1|CA|U|1017
4U27|1|CA|G|1018
4U27|1|CA|A|1019
4U27|1|CA|G|1020
Current chains
- Chain CA
- 16S rRNA
Nearby chains
- Chain CN
- 30S ribosomal protein S14
- Chain CS
- 30S ribosomal protein S19
Coloring options: