HL_4U3M_006

3D structure

PDB id

4U3M (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of Anisomycin bound to the yeast 80S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CAUAG

Length

5 nucleotides

Bulged bases

4U3M|1|1|U|210, 4U3M|1|1|A|211

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4U3M_006 not in the Motif Atlas

Homologous match to HL_5TBW_006

Geometric discrepancy: 0.065

The information below is about HL_5TBW_006

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_71121.1

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

4U3M|1|1|C|208
4U3M|1|1|A|209
4U3M|1|1|U|210
4U3M|1|1|A|211
4U3M|1|1|G|212

Current chains

Chain 1

25s rRNA

Nearby chains

Chain L4

60S ribosomal protein L4-A

Chain N6

60S ribosomal protein L26-A