HL_4U3M_125

3D structure

PDB id

4U3M (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of Anisomycin bound to the yeast 80S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GCCUCGGU

Length

8 nucleotides

Bulged bases

4U3M|1|5|U|545

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4U3M_125 not in the Motif Atlas

Geometric match to HL_5H9F_001

Geometric discrepancy: 0.3142

The information below is about HL_5H9F_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_87553.1

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

4U3M|1|5|G|542
4U3M|1|5|C|543
4U3M|1|5|C|544
4U3M|1|5|U|545
4U3M|1|5|C|546
4U3M|1|5|G|547
4U3M|1|5|G|548
4U3M|1|5|U|549

Current chains

Chain 5

25s rRNA

Nearby chains