HL_4U3M_201

3D structure

PDB id

4U3M (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of Anisomycin bound to the yeast 80S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

UCCUUGUGG

Length

9 nucleotides

Bulged bases

4U3M|1|6|U|718, 4U3M|1|6|U|719

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4U3M_201 not in the Motif Atlas

Homologous match to HL_8P9A_235

Geometric discrepancy: 0.2587

The information below is about HL_8P9A_235

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_20535.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

3

Unit IDs

4U3M|1|6|U|715
4U3M|1|6|C|716
4U3M|1|6|C|717
4U3M|1|6|U|718
4U3M|1|6|U|719
4U3M|1|6|G|720
4U3M|1|6|U|721
4U3M|1|6|G|722
4U3M|1|6|G|723

Current chains

Chain 6

18S rRNA

Nearby chains