HL_4U52_150
3D structure
- PDB id
- 4U52 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of Nagilactone C bound to the yeast 80S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- GUUAUCUUU
- Length
- 9 nucleotides
- Bulged bases
- 4U52|1|5|U|1687
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4U52_150 not in the Motif Atlas
- Homologous match to HL_5TBW_037
- Geometric discrepancy: 0.0928
- The information below is about HL_5TBW_037
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_01927.1
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
4U52|1|5|G|1680
4U52|1|5|U|1681
4U52|1|5|U|1682
4U52|1|5|A|1683
4U52|1|5|U|1684
4U52|1|5|C|1685
4U52|1|5|U|1686
4U52|1|5|U|1687
4U52|1|5|U|1688
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain m9
- 60S ribosomal protein L19-A
- Chain n2
- 60S ribosomal protein L22-A
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