HL_4U67_059

3D structure

PDB id

4U67 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the large ribosomal subunit (50S) of Deinococcus radiodurans containing a three residue insertion in L22

Experimental method

X-RAY DIFFRACTION

Resolution

3.65 Å

Loop

Sequence

AGUCCAUAU

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4U67_059 not in the Motif Atlas

Homologous match to HL_7A0S_059

Geometric discrepancy: 0.1386

The information below is about HL_7A0S_059

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_52011.2

Basepair signature

cWW-tSH-F-F-F-F-F

Number of instances in this motif group

10

Unit IDs

4U67|1|X|A|2450
4U67|1|X|G|2451
4U67|1|X|U|2452
4U67|1|X|C|2453
4U67|1|X|C|2454
4U67|1|X|A|2455
4U67|1|X|U|2456
4U67|1|X|A|2457
4U67|1|X|U|2458

Current chains

Chain X

23s RNA

Nearby chains

Chain E

50S ribosomal protein L6