HL_4UE4_002

3D structure

PDB id

4UE4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural basis for targeting and elongation arrest of Bacillus signal recognition particle

Experimental method

ELECTRON MICROSCOPY

Resolution

7 Å

Loop

Sequence

CAAUCCGCUCUAG

Length

13 nucleotides

Bulged bases

4UE4|1|A|U|45

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4UE4_002 not in the Motif Atlas

Geometric match to HL_8C3A_039

Geometric discrepancy: 0.32

The information below is about HL_8C3A_039

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_71121.1

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

4UE4|1|A|C|42
4UE4|1|A|A|43
4UE4|1|A|A|44
4UE4|1|A|U|45
4UE4|1|A|C|46
4UE4|1|A|C|47
4UE4|1|A|G|48
4UE4|1|A|C|49
4UE4|1|A|U|50
4UE4|1|A|C|51
4UE4|1|A|U|52
4UE4|1|A|A|53
4UE4|1|A|G|54

Current chains

Chain A

6S RNA

Nearby chains