HL_4UE5_001

3D structure

PDB id

4UE5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural basis for targeting and elongation arrest of Bacillus signal recognition particle

Experimental method

ELECTRON MICROSCOPY

Resolution

9 Å

Loop

Sequence

GGUGGCGC

Length

8 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4UE5_001 not in the Motif Atlas

Geometric match to HL_5J7L_014

Geometric discrepancy: 0.3851

The information below is about HL_5J7L_014

Detailed Annotation

GNRA-like with tWH

Broad Annotation

GNRA

Motif group

HL_10453.3

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

9

Unit IDs

4UE5|1|A|G|10
4UE5|1|A|G|11
4UE5|1|A|U|12
4UE5|1|A|G|13
4UE5|1|A|G|14
4UE5|1|A|C|15
4UE5|1|A|G|16
4UE5|1|A|C|17

Current chains

Chain A

7S RNA

Nearby chains