HL_4UG0_036

3D structure

PDB id

4UG0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

STRUCTURE OF THE HUMAN 80S RIBOSOME

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GCGAUGGCCUCCGUUGC

Length

17 nucleotides

Bulged bases

4UG0|1|L5|C|2488, 4UG0|1|L5|C|2489, 4UG0|1|L5|U|2490

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4UG0|1|L5|G|2481
4UG0|1|L5|C|2482
4UG0|1|L5|G|2483
4UG0|1|L5|A|2484
4UG0|1|L5|U|2485
4UG0|1|L5|G|2486
4UG0|1|L5|G|2487
4UG0|1|L5|C|2488
4UG0|1|L5|C|2489
4UG0|1|L5|U|2490
4UG0|1|L5|C|2491
4UG0|1|L5|C|2492
4UG0|1|L5|G|2493
4UG0|1|L5|U|2494
4UG0|1|L5|U|2495
4UG0|1|L5|G|2496
4UG0|1|L5|C|2497

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain L8

5.8S ribosomal RNA; 5.8S rRNA

Chain LX

60S RIBOSOMAL PROTEIN L23A