HL_4UG0_052

3D structure

PDB id

4UG0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

STRUCTURE OF THE HUMAN 80S RIBOSOME

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GGAGUAACUAUGACUCU

Length

17 nucleotides

Bulged bases

4UG0|1|L5|A|3760, 4UG0|1|L5|C|3761, 4UG0|1|L5|A|3766

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4UG0|1|L5|G|3754
4UG0|1|L5|G|3755
4UG0|1|L5|A|3756
4UG0|1|L5|G|3757
4UG0|1|L5|U|3758
4UG0|1|L5|A|3759
4UG0|1|L5|A|3760
4UG0|1|L5|C|3761
4UG0|1|L5|U|3762
4UG0|1|L5|A|3763
4UG0|1|L5|U|3764
4UG0|1|L5|G|3765
4UG0|1|L5|A|3766
4UG0|1|L5|C|3767
4UG0|1|L5|U|3768
4UG0|1|L5|C|3769
4UG0|1|L5|U|3770

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain S2

Small subunit ribosomal RNA; SSU rRNA