HL_4UG0_053

3D structure

PDB id

4UG0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

STRUCTURE OF THE HUMAN 80S RIBOSOME

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CAUCUAAUUAGUG

Length

13 nucleotides

Bulged bases

4UG0|1|L5|U|3802

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4UG0|1|L5|C|3794
4UG0|1|L5|A|3795
4UG0|1|L5|U|3796
4UG0|1|L5|C|3797
4UG0|1|L5|U|3798
4UG0|1|L5|A|3799
4UG0|1|L5|A|3800
4UG0|1|L5|U|3801
4UG0|1|L5|U|3802
4UG0|1|L5|A|3803
4UG0|1|L5|G|3804
4UG0|1|L5|U|3805
4UG0|1|L5|G|3806

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain LV

60S RIBOSOMAL PROTEIN L23

Chain Ln

60S RIBOSOMAL PROTEIN L41

Chain S2

Small subunit ribosomal RNA; SSU rRNA