HL_4UG0_094
3D structure
- PDB id
- 4UG0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- STRUCTURE OF THE HUMAN 80S RIBOSOME
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- UGUUCAAAG
- Length
- 9 nucleotides
- Bulged bases
- 4UG0|1|S2|G|821
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4UG0_094 not in the Motif Atlas
- Homologous match to HL_4V88_203
- Geometric discrepancy: 0.1718
- The information below is about HL_4V88_203
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_47383.2
- Basepair signature
- cWW-F-F-cWW-F-F
- Number of instances in this motif group
- 11
Unit IDs
4UG0|1|S2|U|820
4UG0|1|S2|G|821
4UG0|1|S2|U|822
4UG0|1|S2|U|823
4UG0|1|S2|C|824
4UG0|1|S2|A|825
4UG0|1|S2|A|826
4UG0|1|S2|A|827
4UG0|1|S2|G|828
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain SE
- 40S RIBOSOMAL PROTEIN S4, X ISOFORM
- Chain SJ
- 40S RIBOSOMAL PROTEIN S9
- Chain SY
- 40S RIBOSOMAL PROTEIN S24
Coloring options: