3D structure

PDB id
4UG0 (explore in PDB, NAKB, or RNA 3D Hub)
Description
STRUCTURE OF THE HUMAN 80S RIBOSOME
Experimental method
ELECTRON MICROSCOPY
Resolution
3.6 Å

Loop

Sequence
GCCCCGCCGGGGUGCCCUGGCGGAGCGCGCGGAGCG*C
Length
37 nucleotides
Bulged bases
4UG0|1|S2|C|1773
QA status
Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4UG0|1|S2|G|1749
4UG0|1|S2|C|1750
4UG0|1|S2|C|1751
4UG0|1|S2|C|1752
4UG0|1|S2|C|1753
4UG0|1|S2|G|1754
4UG0|1|S2|C|1755
4UG0|1|S2|C|1756
4UG0|1|S2|G|1757
4UG0|1|S2|G|1758
4UG0|1|S2|G|1759
4UG0|1|S2|G|1760
4UG0|1|S2|U|1761
4UG0|1|S2|G|1771
4UG0|1|S2|C|1772
4UG0|1|S2|C|1773
4UG0|1|S2|C|1774
4UG0|1|S2|U|1775
4UG0|1|S2|G|1776
4UG0|1|S2|G|1777
4UG0|1|S2|C|1778
4UG0|1|S2|G|1779
4UG0|1|S2|G|1780
4UG0|1|S2|A|1781
4UG0|1|S2|G|1782
4UG0|1|S2|C|1783
4UG0|1|S2|G|1784
4UG0|1|S2|C|1785
4UG0|1|S2|G|1777
4UG0|1|S2|C|1778
4UG0|1|S2|G|1779
4UG0|1|S2|G|1780
4UG0|1|S2|A|1781
4UG0|1|S2|G|1782
4UG0|1|S2|C|1783
4UG0|1|S2|G|1784
*
4UG0|1|S2|C|1785

Current chains

Chain S2
18S ribosomal RNA

Nearby chains

Chain LW
60S RIBOSOMAL PROTEIN L24
Chain SG
40S RIBOSOMAL PROTEIN S6

Coloring options:

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